With this post, I’ll start going through the output files newbler generates. Some of these will be d...

Since version 2.3, newbler has a -cdna option for de novo transcriptome assembly. In this post, I’ll...

The single file I’ll discuss today has in fact almost the entire assembly in it, besides the actual ...

I thought to start by explaining briefly how newbler works. I’ll do this by following the output new...

基因组是如何组装的？ 答：一般来说，针对以Illumina Gemone Analyzer测序结果为主的组装策略如下： （1）先利用短序列组装软件对paired-end数据进行de novo拼接，组装...

首先引用一下官方对ABYSS的介绍： ABySS is a de novo, parallel, paired-end sequence assembler that is designed for ...

首先要有Linux环境的服务器或PC，推荐最低需求： 64bit Linux System (Rethat, CentOS, Fedora), 4 core CPU processors, 2.26G...

 Cap3简介 Huang, X. 和 Madan, A 开发的一套用于序列拼接的软件,此软件适用于小的数据集或 EST 拼接,它有如下特征： 利用正反向进行拼接，更正拼接错误、连接 contigs。...