This is the last post in the de Bruijn graph series. Although we did not mention explicitly, each of...
De Bruijn Graphs for Alternative Splicing and Repetitive Regions
Today we shall examine de Bruijn graphs for two structures that occur frequently in genomes or trans...
How do sequencing errors affect de Bruijn graphs?
Today’s commentary is the fourth in our de Bruijn graph series, but I did not like Roman characters ...
De Bruijn graphs(3)
In earlier commentaries, we introduced the concept of de Bruijn graphs and showed how they were used...
De Bruijn graphs(2)
In the previous post, we discussed how de Bruijn graphs can be constructed for a genome or a large s...
De Bruijn graphs(1)
New algorithms for short read assembly (categories B and D) often use de Bruijn graphs to store and ...