AMOS是最早的比较基因组组装软件，AMOS的安装需要先安装MUMer和Qt。
$ wget http://jaist.dl.sourceforge.net/project/mummer/mummer/3.23/MUMmer3.23.tar.gz $ tar zxf MUMmer3.23.tar.gz $ cd MUMmer3.23/ $ make check $ make install $ echo PATH=$PWD/:'$PATH' >> ~/.bashrc $ wget http://download.qt-project.org/official_releases/qt/4.8/4.8.5/qt-everywhere-opensource-src-4.8.5.tar.gz $ tar zxf qt-everywhere-opensource-src-4.8.5.tar.gz $ cd qt-everywhere-opensource-src-4.8.5 $ ./configure $ sudo yum install gstreamer-plugins-base-devel* $ gmake -j 8 $ sudo gmake install $ echo 'PTAH=/usr/local/Trolltech/Qt-4.8.5/bin:$PATH' >> ~/.bashrc $ wget http://nchc.dl.sourceforge.net/project/amos/amos/3.1.0/amos-3.1.0.tar.gz $ tar zxf amos-3.1.0.tar.gz $ cd amos-3.1.0 $ ./configure --prefix=/opt/biosoft/amos $ make -j 8 #然后报错，接着进行下两步（此步省略了貌似会出其它问题） $ sed '1i\#include ' src/Align/find-tandem.cc > tmp $ mv tmp src/Align/find-tandem.cc $ make -j 8 #继续报错,不管 $ make -j 8 #make 成功 $ make install
原文来自：http://www.chenlianfu.com/?p=1902